Showing posts with label Asymptomatic. Show all posts
Showing posts with label Asymptomatic. Show all posts

Saturday, May 17, 2014

MERS And The New Normal

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Credit CDC

 

# 8633

 

While a substantial portion of the MERS cases we’ve seen reported during the past few weeks appear to be related to hospital or healthcare exposures, we continue to see symptomatic cases admitted to the hospital with no mention of known contact with infected cases, medical facilities, or farm animals.  

 

Admittedly, the information we get – particularly out of the Saudi MOH – is less than fully illuminating on these cases.

 

While better epidemiological investigations might yield other explanations, right now there would seem to be two likely sources of continued community infection.


The first being zoonotic; likely through direct contact with infected camels, or indirectly through contact with camel products (milk, meat, animal waste, etc.). 

 

Previously we’ve seen genetic evidence presented suggesting multiple zoonotic introductions of the virus into the human population  (see  The Lancet: Transmission And Evolution Of MERS-CoV In Saudi Arabia) that – while warning that `human-to-human transmission is more complicated than expected’ – also quoted senior author Professor Paul Kellam:

 

“ . . . our findings suggest that different lineages of the virus have originated from the virus jumping across to humans from an animal source a number of times."

 
Making the idea of a `slow rolling spillover event’ at least plausible.  But the author’s of this study also granted another possibility, `. . .  there may be undetected (and possibly asymptomatic) people who could be carrying and spreading the virus.’


At the time that study was released (September 2013), there were just over 100 known cases of MERS, and nearly all were described as seriously ill or fatal.  Mild or asymptomatic cases were beginning to be detected, but were still relatively rare. 

 

Since then, more diligent testing and contact tracing has shown a much larger percentage of mild and/or asymptomatic infections.  The chart below by Dr. Ian Mackay shows that among recent cases, about 20% are described as being `asymptomatic’ (see VDU blog Snapdate: MERS-CoV detected among asymptomatic people).

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Since `asymptomatic’ is a subjective call, it is possible that some of these cases may have had some mild symptoms.  And since KSA only seems to describe cases as being `asymptomatic’, `stable’, or `in intensive care’,  we really don’t know how many `stable’ cases are symptomatic, but only mildly ill.

 

The difference between completely asymptomatic and `mildly ill’ could be significant when it comes to spreading the virus.   While we know that influenza cases can be infectious 24 hours before becoming symptomatic, the jury is still out on whether asymptomatic (or pre-symptomatic) MERS cases can transmit the illness. 

 

While I’m not aware of any studies that have been done to gauge the relative infectiousness of `mildly ill’ vs. `asymptomatic’ cases, it seems likely that those showing some symptoms would be more capable of spreading the disease than those displaying no symptoms at all.   

 

And recent imported cases to the United States and the Netherlands confirm that `mildly ill’ cases can, and do, travel and mingle with people – often for days or longer.   The latest MERS DON from the World Health Organization showed that the second Dutch case might never have been detected were she not part of the contact list of the first case.

 

This second patient has co-morbidities and developed first symptoms, including some breathing difficulties, on 5 May 2014 in Mecca, Saudi Arabia. Upon return to the Netherlands on 10 May, the patient presented with mild respiratory symptoms and fever, but these were not severe enough for her to seek medical help.

 

Presumably, there are some  number of `mildly ill’ MERS cases going undetected in the Middle East, and while many may never pass on the virus to someone else, some probably do.  Depending on such variables as viral load, the recipient’s genetic susceptibility to infection, co-morbidities, and other factors – the chain of infection may end there or continue on.

 

We’ve not seen the kind of exponential growth in MERS cases that would suggest highly efficient community transmission, but we are certainly seeing enough cases to conclude that some community human-to-human transmission is occurring.  

 

And mildly ill (or possibly asymptomatic) cases may very well be behind this spread.

 

While obviously a concern for the community, these mildly ill cases are a greater threat to healthcare facilities, because when they do show up at a health clinic or doctor’s office, their symptoms are often not severe enough to set off alarm bells.  They are viewed initially as having a common URI, or other viral infection, and can end up infecting healthcare workers, or other patients.


Hence the now standard warning to Healthcare providers from the WHO:

 

Infection prevention and control measures are critical to prevent the possible spread of MERS-CoV in health care facilities. Health-care facilities that provide for patients suspected or confirmed to be infected with MERS-CoV infection should take appropriate measures to decrease the risk of transmission of the virus from an infected patient to other patients, health-care workers and visitors. Health care workers should be educated, trained and refreshed with skills on infection prevention and control.


It is not always possible to identify patients with MERS-CoV early because some have mild or unusual symptoms. For this reason, it is important that health-care workers apply standard precautions consistently with all patients – regardless of their diagnosis – in all work practices all the time.


Droplet precautions should be added to the standard precautions when providing care to all patients with symptoms of acute respiratory infection. Contact precautions and eye protection should be added when caring for probable or confirmed cases of MERS-CoV infection. Airborne precautions should be applied when performing aerosol generating procedures.


Patients should be managed as potentially infected when the clinical and epidemiological clues strongly suggest MERS-CoV, even if an initial test on a nasopharyngeal swab is negative. Repeat testing should be done when the initial testing is negative, preferably on specimens from the lower respiratory tract.

 

 

While still a relatively minor threat outside of the Middle East, today HCWs are facing a new infection control challenge. One that may very well expand over the coming months and years, even if the MERS virus never gains greater transmissibility.   


Over the past week we’ve learned more about the two imported US cases, and in both instances, they ended up waiting for hours in a hospital ER before being identified as potential MERS cases, and isolated.  Apparently neither called ahead, or donned a surgical mask before entering the hospital. 

 

Hospital workers, and other patients, were potentially exposed. 

 

While none appear to have caught the virus, many HCWs were furloughed into home quarantine for the duration of the incubation period, and contact tracing and surveillance was instituted for other potential contacts.  An expensive, but necessary, precaution.

 

Should MERS cases begin to turn up more frequently outside of the Middle East, we may very well have to re-examine our blasé attitudes regarding `mild’ respiratory viruses.

 

A good place to start would be posting notices on the door of every ER, doctor’s office, and clinic asking everyone who has any respiratory symptoms to don a surgical mask.  Dispensers could be positioned at the entrance, along with the already ubiquitous alcohol hand sanitizer dispensers.  

 

Frankly, why this isn’t standard operating procedure during every cold and flu season mystifies me.  Seems like common decency to don a mask if there’s any chance you might be contagious to others . . .

 

Thirty years ago the sudden appearance of HIV and an increase in Hepatitis C ushered in new levels of infection control in hospitals and medical facilities.  Exam gloves became de rigueur, and needle sticks became a constant fear.  Gradually, HCWs became accustomed to these precautions, and they became the `new normal’.

 

The saving grace was neither of these viruses was airborne. 

 

Today the emergence of MERS, and novel flu strains like H7N9 and H5N1, ups the ante.  Which means that droplet and/or airborne precautions need to be added to standard precautions to prevent their transmission (see MERS, HCWs, And Infection Control).   The trick is  identifying which patients require these enhanced precautions.

 

Yes, we may get lucky, and MERS may eventually disappear.

 

But the reality is, eventually there will be viral threat to take its place; another pandemic influenza, a different coronavirus, or perhaps something completely out of left field.  And in the meantime, common everyday respiratory viruses (Flu, RSV, adenoviruses, etc) already exact a heavy toll on the public’s health and the economy each year.

 

Which means that now is the right time to begin promoting better respiratory infection control and hygiene – both by the public - and by healthcare professionals.   

 

It will pay big dividends both now, and in the future.

 

Besides, It really shouldn’t take a pandemic to get us to do the responsible thing.

Monday, May 05, 2014

Majumder: An Asymptomatic MERS Transmission Scenario

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Interactive MERS map – Source Maia Majumder

 

# 8568

 

Several days ago on twitter Maia Majumder posited a unique method by which mild or asymptomatic carriers of the MERS virus might transmit the virus to others – particularly in a Middle Eastern hospital situation.  I confess, ever since hearing her idea, I’ve been intrigued.  

 

Maia characterizes her idea as a SWAG, meaning she has no proof – just a hunch, but believes that the scenario deserves investigation.  

 

Today I’m happy to say, she has fleshed out her ideas and has presented them on her blog Mens et Manus.   Follow the link to read:

 

Asymptomatic MERS + Ablution = Transmission?

Asymptomatic MERS has been a hot topic lately.

Since the onset of the current outbreak, 22% of all reported diagnoses – 60 of 279 total – have been asymptomatic. Of those 60, over half of them have been healthcare workers (HCW) [1].

In fact, the data thus far indicates that healthcare workers are far more likely to have asymptomatic MERS than members of the general public. 32 of the 69 healthcare workers that have been diagnosed since March 20th have been asymptomatic [1].

(Continue . . . )

 

While you are at Mens et Manus, take the time to look at Maia’s other offerings, including her interactive MERS map at and her tumblr account http://maiamajumder.tumblr.com/.

Monday, March 17, 2014

Lancet: Community Burden & Severity Of Seasonal And Pandemic Influenza

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Photo Credit CDC PHIL 


# 8379

 

Despite decades of research, a surprising number of seemingly basic questions about the influenza virus, and the host’s immune response to infection, remain less than fully answered.  Questions like:

  • How is the virus most commonly spread? (Aerosolized virus particles, Large Droplets, Fomites . . . )
  • How long are we infectious?
  • How effective are NPIs like masks, eye-protection, hand-washing, social distancing?
  • How common are asymptomatic infections?
  • Can (and do) asymptomatic carriers spread the virus to others?

As you might imagine, public policy decisions - such as when and how long we close schools, what protective gear we should require for health care workers, and how soon those who have been infected should be allowed to return to work - all hinge on having good answers to the above questions.

 

In recent years, research (see PLoS One: Influenza Viral Shedding & Asymptomatic Infections, Influenza Transmission, PPEs & `Super Emitters’ & Study: The Role Of Aerosols In The Spread Of Influenza) has shed considerable light on these issues, but the knowledge gained is incremental, and not always in complete agreement.

 

Today we’ve a major study appearing in The Lancet Respiratory Medicine, that uses  UCL’s FluWatch Study to compile perhaps the most comprehensive multi-year (2006-2011) serological analysis of community influenza we’ve seen to date.

 

The abstract from Cohort Profile: The Flu Watch Study describes the methodology, which involved 5,484 participants from 2,205 households in England.

 

Baseline data were collected on demographic, medical, social and behavioural risk factors and pre-season blood samples taken for immunological assays. Households were contacted weekly to report respiratory symptoms throughout the influenza season and asked to collect nasal swabs during respiratory illnesses for testing for a panel of respiratory viruses using PCR. Post-season blood samples, questionnaires and medical records checks were done.

 

While asymptomatic or sub-clinical infection with the influenza virus is already known to occur with some frequency, this study finds the rate of asymptomatic infection to be higher than commonly suspected.  As many as 75% of those who show serological evidence of infection reported no significant influenza symptoms.

 

First the Abstract, and link to the open access report (which is well worth reading in its entirety), after which I’ll be back with more.

 

Comparative community burden and severity of seasonal and pandemic influenza: results of the Flu Watch cohort study

Dr Andrew C Hayward MD a Corresponding AuthorEmail Address, Ellen B Fragaszy MSc a c, Alison Bermingham PhD d, Lili Wang PhD f, Andrew Copas PhD a, W John Edmunds PhD c, Neil Ferguson DPhil h, Nilu Goonetilleke PhD f g, Gabrielle Harvey MPH a, Jana Kovar PhD a, Megan S C Lim PhD a i, Andrew McMichael PhD f, Elizabeth R C Millett MSc a c, Jonathan S Nguyen-Van-Tam DM j, Irwin Nazareth PhD b, Richard Pebody MBChB e, Faiza Tabassum PhD a, John M Watson FRCP e, Fatima B Wurie BSc a, Prof Anne M Johnson MD a †, Maria Zambon PhD d †, on behalf of the Flu Watch Group

Summary

Background

Assessment of the effect of influenza on populations, including risk of infection, illness if infected, illness severity, and consultation rates, is essential to inform future control and prevention. We aimed to compare the community burden and severity of seasonal and pandemic influenza across different age groups and study years and gain insight into the extent to which traditional surveillance underestimates this burden.

Methods

Using preseason and postseason serology, weekly illness reporting, and RT-PCR identification of influenza from nasal swabs, we tracked the course of seasonal and pandemic influenza over five successive cohorts (England 2006—11; 5448 person-seasons' follow-up). We compared burden and severity of seasonal and pandemic strains. We weighted analyses to the age and regional structure of England to give nationally representative estimates. We compared symptom profiles over the first week of illness for different strains of PCR-confirmed influenza and non-influenza viruses using ordinal logistic regression with symptom severity grade as the outcome variable.

Findings

Based on four-fold titre rises in strain-specific serology, on average influenza infected 18% (95% CI 16—22) of unvaccinated people each winter. Of those infected there were 69 respiratory illnesses per 100 person-influenza-seasons compared with 44 per 100 in those not infected with influenza. The age-adjusted attributable rate of illness if infected was 23 illnesses per 100 person-seasons (13—34), suggesting most influenza infections are asymptomatic. 25% (18—35) of all people with serologically confirmed infections had PCR-confirmed disease. 17% (10—26) of people with PCR-confirmed influenza had medically attended illness. These figures did not differ significantly when comparing pandemic with seasonal influenza. Of PCR-confirmed cases, people infected with the 2009 pandemic strain had markedly less severe symptoms than those infected with seasonal H3N2.

Interpretation

Seasonal influenza and the 2009 pandemic strain were characterised by similar high rates of mainly asymptomatic infection with most symptomatic cases self-managing without medical consultation. In the community the 2009 pandemic strain caused milder symptoms than seasonal H3N2.

Funding

Medical Research Council and the Wellcome Trust.


The bottom line is that during this five-year study period, just under 20% of the (unvaccinated) study cohort contracted the flu each year, but of those, roughly three-quarters did so without displaying classic influenza symptoms. 

 

There are limitations to this study, of course, including low participation rates, no data gathered from patients < 5 years of age, self-reporting of symptoms, and difficulty in obtaining a fully representative sample.

 

Still, the authors report that `Participants were generally highly diligent at completing weekly illness reports and submitting nasal swabs during illness (>85% completion)’.

 

In a related commentary (see Community studies of influenza: new knowledge, new questions),  Dr Peter William Horby  writes:

 

"In view of the undoubtedly high rates of subclinical influenza infection, an important unanswered question is the extent to which mild and asymptomatic influenza infections contribute to transmission…A large number of well individuals mixing widely in the community might, even if only mildly infectious, make a substantial contribution to onward transmission."

 

The question of asymptomatic transmission is an important one, and may well explain the lack of success in interdicting flu carriers at airports and border checkpoints during the 2009 pandemic (see Pathogens At the Gate).  While many nations are quick to set up thermal scanners at entry points, the evidence that they can forestall a virus from entering a country is seriously lacking (see Branswell: Limitations Of Airport Disease Screening).

 

Similarly, telling people who are sick to stay home during an epidemic (while excellent advice), isn’t a panacea to prevent community transmission if 75% of those infected are unaware of the fact they are infected. 

 

The good news in all of this is that 75% of people who get the flu don’t get sick enough to notice it.

 

The bad news is, influenza stealthily infects far more people each year than surveillance would suggest.  And that means that should a highly contagious (and pathogenic) novel virus emerge, controlling its spread may be more challenging than previously envisioned.

 

For more on the plans to mitigate the spread of influenza during a pandemic, you may wish to revisit:

 

Pandemic Preparedness: Taking Our Cue From The Experts
NPM13: Pandemic Planning Assumptions
CDC: Updated H7N9 Guidance Docs

Monday, November 25, 2013

Referral: Dr. Mackay On MERS-CoV, Asymptomatic Infections, And Viral Shedding

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Coronavirus – Credit CDC PHIL

 

 

# 8007

 

 

One of the many unknowns about the MERS coronavirus (and indeed, many other viruses) is how many asymptomatic cases there really are, and whether these cases shed enough virus to be contagious.  With sporadic community cases popping up  the virus must be either quietly circulating, or in the environment somewhere.

 

In August we learned of a man who, while hospitalized in a Saudi facility that reported no other MERS infections, fell ill with the virus 14 days after admission. Given the believed incubation period of < 14 days, this suggests he may have acquired the virus from contact with an asymptomatic carrier inside the hospital (see  Study: Possible Transmission From Asymptomatic MERS-CoV Case).

 

We know that influenza patients can be infectious for up to 24 hours before they display overt symptoms, and some studies suggest that asymptomatic carriers carry a viral load similar to those with symptoms (see PLoS One: Influenza Viral Shedding & Asymptomatic Infections). But how well asymptomatic influenza carriers actually spread the virus remains a topic of considerable debate (see Public Health Report Does Influenza Transmission Occur from Asymptomatic Infection or Prior to Symptom Onset?). 

 

This morning Dr. Ian Mackay takes us on a tour of virus testing (PCR, viral culture, and serology) done for SARS a decade ago, and explains how those results might (or might not) apply to the MERS coronavirus.  Follow the link below to read:

 

 

No symptoms but still shedding virus?

Monday, 25 November 2013

One of the many questions that remain unresolved for MERS-CoV is whether a human who is PCR-positive for the virus, but does not show signs or symptoms of being sick, can spread that infection on to other humans - or animals for that matter.

(Continue . . . )

 

Sunday, August 04, 2013

Study: Possible Transmission From Asymptomatic MERS-CoV Case

Middle East respiratory syndrome coronavirus (MERS-CoV)

Photo Credit WHO

 

 

# 7539

 

 

Overnight Crof carried a report on a study appearing in the International Journal of Infectious Diseases, that suggests a 51 year old man who become infected with the MERS coronavirus during a hospital stay last February in Saudi Arabia probably contracted it from an asymptomatic or unrecognized mild case.

Over the past month, with better testing methods now available, Saudi and UAE health officials have reported on roughly a dozen asymptomatic  or `mild’ infections (see ECDC: 6th MERS-CoV Rapid Risk Assessment).

 

While mild cases provide a welcomed lowering of the mortality rate of this virus, they also open the possibility of unrecognized spread of the virus in the community. 

 

Until now, we’ve not seen any credible evidence of forward transmission from an asymptomatic patient, which has fostered the hope that asymptomatic cases might not be very contagious, and are more apt to turn out to be a`dead-end’ for the virus.

 

In today’s study, we learn of a man who – while hospitalized in a Saudi facility that reported  no other MERS infections – fell ill with the virus 14 days after admission.

 

With a presumed incubation period of less than 14 days, this suggests he was infected during his hospital stay – and likely from an unrecognized mild or asymptomatic patient, visitor, or staff member.

 

The other possibility is that the incubation period can sometimes be longer than 14 days. But we can only go with the evidence we have at the time.

 

First the abstract, then I’ll return with more.

 

A family cluster of Middle East Respiratory Syndrome Coronavirus infections related to a likely unrecognized asymptomatic or mild case

Original Research Article
In Press, Corrected Proof,

Available online 2 August 2013

Ali S. Omrani, Mohammad Abdul Matin, Qais Haddad, Daifullah Al-Nakhli, Ziad A. Memish, Ali M. Albarrak

Background
Ninety confirmed cases of Middle East Respiratory Syndrome Coronavirus (MERS-CoV) have been reported to the World Health Organization. We report the details of a second family cluster of MERS-CoV infections from Riyadh, Saudi Arabia.
Methods

We present the clinical, laboratory and epidemiological details of 3 patients from a family cluster of MERS-CoV infections.

Results

The first patient developed respiratory symptoms and fever 14 days after admission to hospital for an unrelated reason. He died 11 days later with multi-organ failure. Two of his brothers presented later to another hospital with respiratory symptoms and fever. MERS-CoV infection in the latter 2 patients was confirmed by reverse transcriptase polymerase chain reaction testing. All 3 patients had fever, cough, shortness of breath, bilateral infiltrates on chest x-ray, thrombocytopenia, lymphopenia and rises in serum creatinine kinase and alanine transaminase. No hospital or other social contacts are known to have acquired the infection. It appears that the index patient in this cluster acquired MERS-CoV infection whilst in hospital from an unrecognized mild or asymptomatic case.

Conclusion

MERS-CoV acquisition from unrecognized mild or asymptomatic cases may be a more important contributor to ongoing transmission than previously appreciated.

 

 

Asymptomatic, subclinical, or extremely mild symptoms with viral infections are quite common, and with some viruses are the norm rather than the exception.

 

A classic example being polio, where 95% of those infected remain asymptomatic, yet they are still capable of spreading the virus.

image

 

Last year, in The Very Common Cold, we looked at a study of college students that found asymptomatic Rhinovirus infections led symptomatic infections by a whopping factor of 4 to 1.

 

Those with asymptomatic infections showed lower viral loads than those displaying cold symptoms - suggesting that they may be less efficient spreaders of the virus – but we don’t have enough data to know how much of a viral load it takes to spread the virus.

 

Also last year, in  PLoS One: Influenza Viral Shedding & Asymptomatic Infections, we saw a small study that found 21% of adult secondary influenza cases were asymptomatic or subclinical, yet they shed roughly the same quantity of virus as those showing clinical signs of illness.

 

While there are few studies looking at asymptomatic SARS cases (another coronavirus) from 2003, we’ve a serology study that found a small, but significant percentage of asymptomatic cases (EID journal  2005 Asymptomatic SARS Coronavirus Infection among Healthcare Workers, Singapore).

 

In this study, the incidence of severe disease among those seropositive for the SARS virus was 82%. Only 4% displayed milder symptoms, while surprisingly, 13% were asymptomatic. 

 

Admittedly, MERS-Cov isn’t SARS, but it's the closest analogue we have right now.

 

Transmission of SARS – even among those who were seriously ill – varied widely. A few patients were `super-spreaders’ - infecting multiple contacts - while a great many did not appear to transmit the virus forward at all (cite MMWR Severe Acute Respiratory Syndrome --- Singapore, 2003).

 

The role (if any) of asymptomatic transmission during the SARS outbreak a decade ago remains poorly understood.

 

Although we’ve only one report of probable viral acquisition from a mild or asymptomatic source, there are other cases out there that  may well have been infected in a similar fashion.  

 

While sporadic community cases occurring across the middle east over the past 18 months have been assumed to be the result of a repeated spillovers from an (as yet, unknown) animal host, some could also be the result of transmission from a mild or asymptomatic case.

 

The only way to get a handle on the true incidence of this virus is through extensive testing – not only of those showing symptoms – but of the general population as well (serology studies).

 

A topic that Dr. Ian Mackay writes at length on this morning in his excellent Virology Down Under blog. Follow the link to read:

 

MERS-CoV: Family cluster, untested case, delayed reporting, missing data

Tuesday, June 18, 2013

MERS-CoV: Early Serological Results

Coronavirus

Photo Credit NIAID

 

 

 

# 7406

 

 

During my brief absence yesterday Helen Branswell of the Canadian Press broke the big story of the day, the long awaited results from retrospective testing of suspect cases from Jordan MERS-CoV cluster in April of 2012.

 

If there’s anyone who hasn’t already read her article, I would invite you to do so now.  When you return, I’ll have more:

 

Earliest known MERS outbreak, in Jordan, infected at least 10 people

Helen Branswell The Canadian Press  June 17, 2013

 

 

The serological testing methods employed in testing these Jordanian cases are still in the early stages of development, and have not been fully validated. So, the actual number of contacts in this cluster who may have been infected could eventually go higher.

 

The CDC appears confident that the positive results they’ve returned are truly positive, but negative results are less certain.

 

At least one of the newly identified seropositive cases reports not having been ill during the outbreak while another reported only mild symptoms. These two cases raise new questions over asymptomatic or subclinical infection with the virus.  

 

A topic that Dr. Ian Mackay addresses in his Virology Down Under column overnight.

 

MERS-CoV in the Asymptomatic?

ProMED noted an article by Helen Branswell (here), that reports on serology results we'd previously mentioned were coming from a collaboration between the Jordanian MOH and the US CDC.

 

124 people were tested from the April 2012 outbreak of pneumonia in Zarqa, Jordan - and 8 people were antibody-positive, identifying an immune response to infection by the MERS-CoV.

 

This brings the MER-CoV total up to 72 with 38 deaths and drops the CFR from 59% to 52%; as happens when you raise the denominator.

 

<SNIP>

So, (yet again-seems like only yesterday I was talking about this) there are signs that this respiratory virus, like other before it, may present in a spectrum of clinical situations ranging from severe (where the virus is an opportunistic pathogen among predominantly older males with "underlying medical conditions") through to asymptomatic.

 

It should come as no surprise to readers of this blog, what my next comment will be. We need to test prospectively and not reactively. Not just using serological assays but also by PCR. Otherwise we keep stumbling around in the dark.

 

Perhaps we could even go so far as to start assuming that each virus can travel both stealthily and "loudly", instead of assuming they can't. Just sayin'

(Continue . . . )

 

 

If Ian’s blog isn’t already part of your daily internet infectious disease tour, I would encourage you to add it to your itinerary.

 

Whenever a new virus begins to circulate in humans we tend to only see the `sickest of the sick’ show up at hospitals. This initially skews our perception of just how deadly an outbreak might be.

 

Over time, as better diagnostics are developed and more samples are tested, we usually discover a broader spectrum of clinical illness, which brings down the mortality rates.

 

Mild or asymptomatic infections are a hallmark of nearly every infectious disease, although their incidence varies widely. How a disease presents in an individual depends greatly on the competence of their immune system, previous exposures, age, and other comorbidities.

 

Last year, in The Very Common Cold, we looked at a study of college students that found asymptomatic Rhinovirus infections led symptomatic infections by a whopping factor of 4 to 1.

 

Those with asymptomatic infections showed lower viral loads than those displaying cold symptoms - suggesting that they may be less efficient spreaders of the virus – but we don’t have enough data to know how much of a viral load it takes to spread the virus.

 

In 2011, in EID Journal: Pre-Symptomatic Influenza Transmission, we saw evidence of presymptomatic spread of the H1N1 virus in three clusters in Japan, which also suggests that asymptomatic carriers ought to be able to spread the virus as well.

 

And last year, in  PLoS One: Influenza Viral Shedding & Asymptomatic Infections, we saw a small study that found 21% of adult secondary influenza cases were asymptomatic or subclinical, yet they shed roughly the same quantity of virus as those showing clinical signs of illness.

 

Of course, MERS-CoV isn’t influenza or a Rhinovirus, which makes comparisons difficult. We do, however, have a serology study from the 2003 SARS (coronavirus) epidemic that found a small, but significant percentage of asymptomatic cases as well.

 

Volume 11, Number 7—July 2005
Dispatch

Asymptomatic SARS Coronavirus Infection among Healthcare Workers, Singapore

Annelies Wilder-Smith , Monica D. Teleman, Bee H. Heng, Arul Earnest, Ai E. Ling‡, and Yee S. Leo

Author affiliations: *Tan Tock Seng Hospital, Singapore; †National Healthcare Group, Singapore; ‡Singapore General Hospital, Singapore

 

We conducted a study among healthcare workers (HCWs) exposed to patients with severe acute respiratory syndrome (SARS) before infection control measures were instituted. Of all exposed HCWs, 7.5% had asymptomatic SARS-positive cases. Asymptomatic SARS was associated with lower SARS antibody titers and higher use of masks when compared to pneumonic SARS.

 

<SNIP>

 

Patients with a positive SARS serologic result, fever, respiratory symptoms, and radiologic changes consistent with pneumonia were defined as having pneumonic SARS. SARS-CoV–positive patients with fever and respiratory symptoms without radiologic changes were defined as having subclinical (nonpneumonic) SARS. SARS-CoV–positive patients without fever or respiratory symptoms were defined as having asymptomatic SARS-CoV infection.

 

<SNIP>

 

Of these 80 hospital staff, 45 (56%) were positive by SARS serology. Of the 45 SARS-CoV–positive study participants, 37 (82%) were classified as having pneumonic SARS, 2 (4%) as having subclinical SARS, and 6 (13%) as having asymptomatic SARS-CoV infection (Table 1). Four staff members had fever and cough but negative SARS serologic test results; none of them was diagnosed as having suspected SARS by the hospital's SARS outbreak team. The overall incidence of asymptomatic SARS-CoV infection was 6 (7.5%) of 80.

 


In this study, the incidence of severe disease among those seropositive for the virus was 82%. Only 4% displayed milder symptoms, while surprisingly, 13% were asymptomatic. 

 

Admittedly, MERS-Cov isn’t SARS either. But it's the closest analogue we have right now.

 

 

It will take validation of the serology tests and more extensive seroprevalence testing before we can get a good idea of how well MERS-CoV spreads among humans, it’s average severity, and the spectrum of disease it produces.

 

But at least the tools needed to do that are beginning to become available.

Monday, April 15, 2013

Concerns Over Asymptomatic H7N9 Case In Beijing

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FluTrackers Map of Cases Thru April 14th Credit Laidback Al

 

# 7138

 

The news of a second virus-positive case detected in Beijing - first mentioned yesterday by Crof, and that I wrote in Newshounds On The Trail Of The Latest Beijing H7N9 Report – has the unusual twist that this 4-year old hasn’t shown clinical symptoms of infection.


Since the vast majority of H7N9 cases detected to date have exhibited severe symptoms, this latest finding confirms that the virus can also generate mild, or sub-clinical symptoms in humans (we already know of its low pathogenicity in birds).  

 

And that not only makes it harder to identify (and by inference, contain), it also suggests there may already be more cases out there than we currently are aware of.

 

Delving into all this is one of our favorite flu journalists Jason Gale, who interviews Dr. Ian MacKay (see VDU: Updated H7N9 Charts) - associate professor of clinical virology at the University of Queensland – and others, on what this may mean.

 

A short excerpt, but follow the link to read Jason’s full article, which also includes statements by Sinovac Biotech Ltd. CEO Yin Weidong and Michael O’Leary, WHO’s China representative.

 

Symptom-Free Bird Flu Case Suggests Wider H7N9 Spread

By Bloomberg News - Apr 15, 2013 3:46 AM ET

Bird flu was found in a 4-year-old Beijing boy who has no symptoms of the infection, health authorities said, suggesting more people may be catching the H7N9 influenza virus than reported.

 

The boy is under medical observation. The case suggests some H7N9 infections may be going unrecorded because of a lack of obvious symptoms. Almost all the 60 previous cases in eastern China were extremely unwell, with complications extending to brain damage, multi organ failure and muscle breakdown.

 

“With asymptomatic cases around, I think everything changes,” said Ian Mackay, an associate professor of clinical virology at the University of Queensland in Brisbane, in a telephone interview today. “There has been a spike in pneumonia cases that have drawn the health officials’ attention, but the virus may have been going around as a normal cold.”

(Continue . . . )

 

Dr. Mackay goes on to state `“It’s essential that lab testing of contacts is carried out as soon as possible to give us some information about the denominator: how many cases are positive for this virus, whether they’re symptomatic or not.’

 

Writing on his own website – Virology Down Under – Ian notes:

 

Added 15.04.13. Multiple reports of the first asymptomatic case in a 4-year old male (4M) living across the street from the previously H7N9-POS, 7F. This may demystify a lot of H7N9 confusion as well as seriously increase the threat level for H7N9 spread...a stealth virus not only in poultry but humans is a new game.

As I've suggested earlier, the widespread use of sensitive molecular detection methods, not just on the cases with the most severe clinical signs and symptoms, is absolutely essential to detect mild or asymptomatic cases of infection. The use of PCR in this way seems to have done just that. I'll keep a close eye on this story but I suspect it will result in a drastic change to the landscape of detection numbers and epidemiology.

Symptoms alone tell only a small part of the story of any respiratory virus. This may strengthen the case for H7N9 having been in the community for much longer than the pneumonia cases officially commencing back in Feb, suggest.


You’ll find a lot more at his website, plus his H7N9 dedicated page has some of the best graphics and analysis going.

 

Mild or asymptomatic carriage of the H7N9 virus would  seriously impact attempts to detect and contain the virus. 

 

Asymptomatic infection with influenza is believed to be fairly common (albeit, by its very nature, difficult to quantify), and is something we’ve discussed before, most recently in  PLoS One: Influenza Viral Shedding & Asymptomatic Infections .

 

This particular study was conducted in Germany over 4 flu seasons (2007-2011) and involved four flu strains; seasonal (A(H3N2), A(H1N1), influenza B, and pandemic (A(H1N1)pdm09.

 

Among their findings: 

  • Nearly 1/3rd of cases began shedding virus while pre-symptomatic
  • Viral loads in (six studied) asymptomatic cases were similar to that to patients exhibiting ILI (influenza-like-illness) symptoms.
  • Viral load among symptomatic patients peaked on illness days 1, 2 or 3 and declined steadily until days 7–9

 

Of course, how closely these results might align with how the H7N9 virus behaves, when (or if) it ever becomes more transmissible, is unknown.

 

In Branswell: Limitations Of Airport Disease Screening, we saw that it was asymptomatic and pre-symptomatic carriers of the 2009 H1N1 virus that largely thwarted attempts at detection at ports of entry during the opening months of the 2009 pandemic.

 

With the SARS outbreak of 2003, it was the lack of asymptomatic (or pre- symptomatic) transmission of the virus that has often been credited for making it possible to contain.

 

The one advantage that we still appear to have over the H7N9 virus is that based on the evidence to date (always subject to change), this virus does not yet appear to be transmitting efficiently in the community.

 

The World Health Organization is aware of a few `family clusters’ that may indicate human-to-human transmission of the virus, and therefore state:

 

image



Whether that bit of luck with this virus continues will determine just how much impact this virus will have outside of China.


Stay tuned.

Wednesday, February 22, 2012

H5N1: Hiding In Plain Sight

 

 

image

Photo Credit – FAO


# 6164

 

A pair of related stories this morning that reinforce the notion that in some places the H5N1 virus may be hiding in the environment, or alternatively, in healthy looking chickens.

 

Neither of which are exactly new ideas, but thus far evidence for both scenarios has been less than overwhelming.

 

First, as study out of Cambodia (h/t Tetano on FluTrackers) that was published on Feb. 17th by the journal Influenza and Other Respiratory Viruses.

 

In this study, environmental samples were collected following outbreaks of bird flu in Cambodia between April 2007 and February 2010.

 

 

Environment: a potential source of animal and human infection with influenza A (H5N1) virus

Srey V. Horm, Ramona A. Gutiérrez, San Sorn, Philippe Buchy

Article first published online: 17 FEB 2012

DOI: 10.1111/j.1750-2659.2012.00338.x

ABTRACT (excerpt)

Results Of a total of 246 samples, 46 (19%) tested positive for H5N1 by qRT-PCRs. Viral RNA was frequently detected in dust, mud and soil samples from the farms’ environment (respectively, 46%, 31% and 15%).

Samples collected from ponds gave a lower proportion of positive samples (6%) as compared to those collected from the farms (24%). In only one sample, infectious virus particles were successfully isolated.

Conclusion During H5N1 virus outbreaks, numerous environmental samples surrounding outbreak areas are contaminated by the virus and may act as potential sources for human and/or animal contamination.

 

It should be noted that given the sensitivity of modern RT-PRC testing, the ability to detect a virus in the environment doesn’t always tell us if it is viable.  That is . . .  whether it remains capable of infecting a host.

 

This report reinforces similar research over the past few years that have expressed similar concerns.

 


During the summer of 2010, in a blog called Of Ducks, And Feathers, And H5N1 we looked at a study that determined that the H5N1 virus may persist on the dropped feathers from infected ducks and that they may spread the virus to the environment.

 

The surprising part of this study is how long these feathers retained some degree of viral contamination at various temperatures.

 

At 4°C (39F) the virus was detectable for 160 days, while at the higher temperature 20°C (68F), the virus was detected for 15 days.

 

The following month, in a study that appeared in Environmental Science and Technology titled:

 

Environmental Persistence of a Highly Pathogenic Avian Influenza (H5N1) Virus

Joseph P. Wood, Young W. Choi, Daniel J. Chappie, James V. Rogers, and Jonatha

n Z. Kaye

DOI: 10.1021/es1016153

Copyright © 2010 American Chemical Society

 

Researchers conducted tests on four inanimate materials (glass, wood, galvanized metal, and top soil) to determine how long – and under what environmental conditions – the virus could survive.

 

They adjusted factors such as  temperature, relative humidity, and simulated sunlight and checked the samples over a period of 13 days.

 

The virus was most persistent at lower temperatures, and on surfaces such as glass and steel. Their conclusion?: at these conditions, the virus would be expected to persist appreciably beyond 13 days.

 

And in November of 2010, we saw an EID Journal study that surveyed LBMs (Live Bird Markets) in Indonesia, and found traces of the H5N1 virus in nearly half of the environmental samples tested (see EID Journal: Indonesian Bird Markets Tested For H5N1).

 

 

Next stop, comments published today in the Indonesian newspaper TEMPO  (h/t Commonground) from Professor C.A. Nidom, of the Institute of Tropical Disease, Airlangga University. 


He repeats a warning that he (and others) have given before; that ineffective or improperly dispensed poultry vaccines can mask H5N1 infection in poultry, allowing people to be exposed via `healthy looking’ chickens.

 

 

Wednesday, February 22, 2012 | 10:43 pm

Can Bird Flu Virus Found in Poultry Healthy

TEMPO.CO, Jakarta - Head of Avian Influenza, Zoonosis Research Center University of Airlangga, CA Nidom, said that the bird flu virus (H5N1) can be found in healthy birds. Under these conditions because the vaccine is given to poultry.

He said the bird flu in poultry vaccine made antibodies to poultry so that the birds will stay healthy and not die even if hit by bird flu virus. As a result, signs of the virus has already infected, but not seen. So that public awareness is less because they think that their birds have in a healthy state.

"Our research states that avian flu has been vaccinated birds can still carry the virus even look healthy," he said by telephone on Wednesday, February 22, 2012.

(Continue . . .)

 

If this sounds familiar, you may recall that Dr. Nidom has previously warned on using poultry vaccines to control Indonesia’s bird flu problem (see Indonesia: Debate Over Poultry Vaccination), as opposed to culling.

 


Similar warnings were expressed in early 2009 from Zhong Nanshan, a hero of the SARS outbreak and a highly respected respiratory disease specialist in China, who warned that vaccinated poultry can still become infected with the H5N1 virus.

 

Chinese expert issues new bird flu warning

www.chinaview.cn  2009-02-06 17:59:50

GUANGZHOU, Feb. 6 (Xinhua) -- A leading Chinese expert on respiratory diseases has warned the public to be aware that poultry can be infected with the bird flu virus but show no symptoms.

 

"Special attention should be paid to such animals, including those that have been vaccinated," said Zhong Nanshan.

 

"The existing vaccines can only reduce the amount of virus, rather than totally inactivating it," he said.

(Continue . . . )

 

The OIE (World Organization For Animal Health) has been aware of the potential of vaccines to hide infection for many years, warning that vaccination of poultry cannot be considered a long-term solution to combating the avian flu virus.

 

In Avian influenza and vaccination: what is the scientific recommendation?, the OIE reiterates their strong recommendation that humane culling be employed to control avian influenza, and advising that vaccines should only be used as a temporary measure.

While the OIE concedes that some nations may require the use of vaccines for `several years', they strongly urge that countries move away from that program and towards the more conventional culling policy.

They call this shift away from vaccines an `Exit Strategy’, something which China, Indonesia, Vietnam, and have shown no move towards.

 

And the big news now out of Vietnam over the past year has been the failure of their poultry vaccine against the emerging 2.3.2.1 clade of the virus which is now widely circulating in the north.

 

In August 2011 the FAO issued a statement on this 2.3.2.1 clade (see FAO Warns On Bird Flu) that is not covered by currently available poultry vaccines.

 

Despite the growing concerns over asymptomatic poultry carrying the H5N1 virus, and evidence of environmental contamination by the virus, the limited number of human cases we have seen to date indicate that the virus still has a hard time infecting humans.

 

It is adapted to avian physiology – not human - and must mutate further if it is to become an imminent public health threat.

 

But with 20+ clades of the virus now circulating, and numerous opportunities to expose and infect other hosts (human, swine, mammal, and avian), the virus may one day succeed.

 

image

 

Which is why the world remains in pre-pandemic phase III on the H5N1 virus, and we watch its progress intently.

Tuesday, February 14, 2012

Indonesia: Concerns Over Changes In Avian Flu Symptomology

 

image

Photo Credit – FAO

# 6142

 

With influenza viruses, the only true constant is change.

 

Viruses must continually evolve and adapt in order to survive. The legacy of infection by a virus is usually some degree of immunity, and if viruses did not evolve they would soon run out of susceptible hosts.

 

Minor mutations happen all of the time, but most turn out to be evolutionary dead-ends. They confer no biological advantage to the virus, fail to thrive, and die out. 

 

It is only when the right combination of changes occurs that changes the virus’s antigenic profile or enhances transmissibility or replication – or expands its host range – while still remaining `biologically fit’, that a new strain begins to flourish and spread.

 

And those types of changes can happen very quickly, or they can take years in coming.

 

It is this evolutionary process that has led to having 20+ clades (major versions) of the H5N1 virus circulating around the world, including the vaccine resistant strain clade 2.3.2.1 (see  FAO Warns On Bird Flu) that began to emerge in 2010.

 

 

With so many different clades in circulation, it is no wonder we see some variations in the way the virus behaves.

 

All of which serves as prelude to a long report appearing today in the Indonesian Newspaper Kompas, which talks about a moderation in outward signs of infection among poultry.

 

 

Those with long memories may recall we discussed similar concerns back in 2009 (see Bird Flu Symptoms Changing In Indonesia).  Three years ago the Dean of Faculty of Veterinary Medicine, Institut Pertanian Bogor was quoted as saying:

 

“Common signs as cyanosis of wattle, comb or fetlock are not observed anymore. Mortality also decreases so that it’s difficult to differ between ND and AI”

 

So while perhaps becoming more common today, these changes do not appear to be entirely new.

 

Included are also some comments by Professor C.A. Nidom, on the dangers of H5N1 reassortment. My thanks to Shiloh on FluTrackers for finding, and translating the following article (original link).

 

Be warned, this is a machine translation, and so the syntax is a bit mangled. 

 

Can Bird Flu Virus More Dangerous


Asep Chandra | Tuesday, February 14, 2012 | 9:28 pm

Jakarta, Kompas - The bird flu virus (H5N1) in Indonesia is thought to have changed. The virus is feared more dangerous than before. Further research is needed to ensure the fatality rate of the new virus.

 

Reports from a number of areas, until Monday (13/Feb), indicating the change. Even so, not yet ascertained the impact of the change.

 

Head of Animal Husbandry and Animal Health in Central Java Semarang District Whitono reveals, some poultry that died of bird flu now has features that are not as usual, ie no black or bluish spots on the comb or body part that is not hairy.

 


Meanwhile, Head of Animal Health Animal Husbandry and Animal Health Central Java Eko Sutarti revealed, though not sure about the new virus, characteristics of birds that died of bird flu part shifted. Usually the birds that died of bird flu are marked with blue or black spots on the comb or body parts that are not covered in fur.

 

Now the poultry that died suddenly without these spots were found positive for bird flu.

 

Of Brebes, Central Java, reportedly, the body's defense system against virus attacks poultry in the region changed when compared with previous years. This is evident from the clinical symptoms found in cases of chicken deaths in the region last week.


Head of Animal Health and Veterinary Public Health Veterinary Services Brebes Jhoni Murahman say, around 2003, when he first outbreak of bird flu virus in Bradford, clinical symptoms of bird deaths at that time happened very quickly and in large quantities.

 

Physical signs in birds that died of bird flu is also very clear, that the body was black, very much saliva, swollen heads and blue crest on the head.

 

However, at present, clinical symptoms are not very visible. Poultry deaths tend to be in unison, but one by one. Body of dead birds as well just turn blue with not a lot of saliva and the head is not swollen.


Chairman of the Avian Influenza Research Center, zoonosis, which is also a lecturer at the Faculty of Veterinary Medicine Airlangga University, Surabaya, CA Nidom, say, the existence of the bird flu virus in Indonesia to worry about. "There are allegations of meetings between the H5N1 virus (bird flu) and pan2009 A H1N1 (swine flu) in Indonesia. This could produce a new type of virus is more dangerous, "he said.

 

(Continue . . . )

Over the years concerns have been voiced that inconsistent or poorly matched poultry vaccination programs could be driving the evolution of the H5N1 virus.

 

As new clades emerge, vaccination of birds with existing vaccines may still lessen morbidity and mortality in the flocks, but not prevent infection.

 

Creating, in a sense, a `stealth' bird flu virus; one that doesn't announce itself with clearly observable symptoms.

 

And that, one would have to assume, only serves to increase the chances that more people and more poultry will be inadvertently exposed to the virus.

Tuesday, November 24, 2009

UK: H1N1 Serology Tests Reveal Significant Asymptomatic Rate

 

 

# 4074

 

It comes as no surprise that a certain percentage of people who are exposed to the pandemic flu virus go on to develop antibodies without experiencing clinical symptoms. 

 

With seasonal flu, it is expected that anywhere from 1/3rd to 1/2 of people exposed, never fall ill.

 

But when a new virus appears, until serology tests can be conducted, we don’t have a good handle on what percentage might remain asymptomatic.

 

 

Earlier this months I reported on New Zealand’s plans to test the blood of 2,500 people (see New Zealand To Conduct Seroprevalence Studies) to try to determine the actual rate of infection over the summer.  Other countries are doing so, as well.



Today we learn of a relatively small study, conducted in the UK, of school aged children to determine how many have elevated antibody titers to the novel H1N1 virus.  

 

The results are encouraging, in that a substantial percentage (about 1/3rd) of the children tested show antibodies to the virus, while only about 1 in 10 reported flu symptoms.   

 

This report from the BBC.

 

 

More children 'than expected have had swine flu'

 

By Nick Triggle
Health reporter, BBC News

Up to a third of children in some areas may have had swine flu, but many will not have been ill, analysis shows.

The Health Protection Agency has reviewed blood tests which showed higher levels of infection among children than originally thought.

 

In hotspot areas, such as London and the West Midlands, a third of school-aged children may have had the virus, but only one in 10 or less got ill.

 

Across the UK, the figure is probably about a fifth, the HPA said.

 

The findings reinforce the fact the pandemic is a mild strain of flu.

 

Flu, whether it is seasonal or swine, always affects more people than actually get ill.

 

The ratio is normally about 50-50 and pandemic flu is probably not much different, the HPA said.

 

(Continue . . . ) 

 


Fergus Walsh, medical correspondent for the BBC, who writes the Fergus on Flu blog, has more at:

 

Up to a third of children in some areas have been infected

Fergus Walsh | 16:54 UK time, Tuesday, 24 November 2009